General Search Options

• -evalue <Real>
    Expectation value (E) threshold for saving hits
    Default = '10'

• -max_target_seqs <Integer, >=1>
    Maximum number of aligned sequences to keep

• >JQ040772.1 Porcine reproductive and respiratory syndrome virus clone AF1108US glycoprotein 5 gene, complete cds
  ATGTTGGGGAAATGCTTGACCGCGGGCTGTTGCTCGCGATTGCTTTCTTTGTGGTGTATC
  GTGCCGTTCTGTTTTGCTGTGCTCGCCAACGCCAGCAACACCAACAGCTCTCATTTTCAG
  TTGATTTATAACTTGACGCTATGTGAGCTGAATGGTACGGACTGGCTGGCTAACAAATTT
  GATTGGGCAGTGGAGAGTTTTGTCATCTTTCCCGTACTAACTCACATCATTTCCTATTGT
  GCTCTCACCACGAGCCATTTCCTTGACACAGTCGGTCTGGTTACTGTGTCCACCGCCGGT
  TTTTATCACGGGCGGTATGTCTTGAGTAGCATTTACGCAGCCTGTGCCCTGGCTGCGTTG
  ATCTGCTTCGTCATTAGGTTGACGAAGAACTGCATGTCCTGGCGCTACTCATGTACTAGA
  TACACCAATTTCCTTCTGGACACCAAGGGTAAACTCTATCGTTGGCGATCGTCCGTCATC
  ATAGAGAGAGGGGGTAAAGTTGAGGTCGGAGGTCATCTCATCGACCTTAAAAGAGTTGTG
  CTTGACGGTTCCGCGGCAACCCCTTTAACCAAAGTTTCAGCGGAACAATGGGGTCGTCCT
  TAG